Start Mercator Job

General
Parameters
TAIR:   TAIR Release 10
PPAP:   SwissProt/UniProt Plant Proteins
CHLAMY:   JGI Chlamy release 4 Augustus models
ORYZA:   TIGR5 rice proteins
KOG:   Clusters of orthologous eucaryotic genes database (KOG)
CDD:   Use conserved domain database
IPR:   Include interpro scan (long runtime)
BLAST_CUTOFF: 
MULTIPLE:   Allow multiple bin assignments
CONSERVATIVE:   Consider the "unassigned" bin with equal weight when assigning bincodes.
ANNOTATE:   Append database annotation to mapping
IS_DNA:   Sequence file contains DNA sequence
Input Sequence

PLEASE NOTE:
Maximally 30 * 106 symbols (nucleotides or aminoacids) may be uploaded in FASTA format.
If you would like to submit a larger data set, please contact us.

Mercator

Mercator v.3.6

  •  See navigation tab about Mercator for details about the Mercator v.3.6 online plant protein annotation tool
  •  If you find Mercator v.3.6 useful please cite:

Lohse M, Nagel A, Herter T, May P, Schroda M, Zrenner R, Tohge T, Fernie AR, Stitt M, Usadel B

Mercator: a fast and simple web server for genome scale functional annotation of plant sequence data.

Plant Cell Environ. 2014 May; 37(5): 1250-1258

 

Please evaluate this service! Give your feedback